ISDA

Deposition Date 2021-11-25

Release Date 2022-09-14

Last Version Date 2023-11-29

Entry Detail

PDB ID:

7W3L

Keywords:

OXIDOREDUCTASE

Title:

Crystal structure of LSD1 in complex with cis-4-Br-2,5-F2-PCPA (S1024)

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.51 Å

R-Value Free:

0.21

R-Value Work:

0.17

R-Value Observed:

0.18

Space Group:

P 61 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Lysine-specific histone demethylase 1A
Gene (Uniprot):KDM1A
Chain IDs:A
Chain Length:669
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:O60341 Pfam ID:PF04433, PF01593 EC:1.14.11.65

Ligand Molecules

8A2

FAD

GOL

TLA

Primary Citation

Structure-Activity Relationship and In Silico Evaluation of cis- and trans-PCPA-Derived Inhibitors of LSD1 and LSD2

Niwa, H, Watanabe, C, Sato, S, Harada, T, Watanabe, H, Tabusa, R, Fukasawa, S, Shiobara, A, Hashimoto, T, Ohno, O, Nakamura, K, Tsuganezawa, K, Tanaka, A, Shirouzu, M, Honma, T, Matsuno, K, Umehara, T.Show

Acs Med.Chem.Lett. 13 1485 1492 (2022)

DOI: 10.1021/acsmedchemlett.2c00294

Primary Citation of related structures