7W07 image
Entry Detail
PDB ID:
7W07
Keywords:
Title:
Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate, Space group C121.
Biological Source:
PDB Version:
Deposition Date:
2021-11-17
Release Date:
2022-10-26
Method Details:
Experimental Method:
Resolution:
1.48 Å
R-Value Free:
0.19
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transcriptional regulator, LysR family
Chain IDs:A
Chain Length:292
Number of Molecules:1
Biological Source:Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Primary Citation
A genetically encoded fluorescent biosensor for detecting itaconate with subcellular resolution in living macrophages.
Nat Commun 13 6562 6562 (2022)
PMID: 36333306 DOI: 10.1038/s41467-022-34306-5

Abstact

Itaconate is a newly discovered endogenous metabolite promoting an anti-inflammatory program during innate immune response, but the precise mechanisms underlying its effect remains poorly understood owing primarily to the limitations of available itaconate-monitoring techniques. Here, we develop and validate a genetically encoded fluorescent itaconate biosensor, BioITA, for directly monitoring itaconate dynamics in subcellular compartments of living macrophages. Utilizing BioITA, we monitor the itaconate dynamics in response to lipopolysaccharide (LPS) stimulation in the context of modulating itaconate transportation and metabolism. Moreover, we show that STING activation induces itaconate production, and injection of AAVs expressing cytosolic BioITA into mice allows directly reporting elevation of itaconate level in activated macrophages derived from LPS-injected mice. Thus, BioITA enables subcellular resolution imaging of itaconate in living macrophages.

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