7VYX image
Deposition Date 2021-11-15
Release Date 2022-11-02
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7VYX
Keywords:
RNA BINDING PROTEIN/RNA/DNA
Title:
Crystal structure of the selenomethionine(SeMet)-derived Cas12c1 (D969A) ternary complex
Biological Source:
Source Organism:
Parasutterella muris (Taxon ID: 2565572)
Escherichia coli (Taxon ID: 562)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
3.20 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
7VYX validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Selenomethionine (SeMet)-labeled Cas12c1 D969A mutant
Mutations:D969A
Chain IDs:A, B
Chain Length:1310
Number of Molecules:2
Biological Source:Parasutterella muris
UniProt ID:A0A9X9ZA50
Polymer Type:polyribonucleotide
Molecule:sgRNA
Chain IDs:C, D
Chain Length:136
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polydeoxyribonucleotide
Molecule:Target DNA strand
Chain IDs:E, F
Chain Length:31
Number of Molecules:2
Biological Source:Escherichia coli
Polymer Type:polydeoxyribonucleotide
Molecule:Non-target DNA strand
Chain IDs:G, H
Chain Length:23
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
ZN
Primary Citation
Structural insights into target DNA recognition and cleavage by the CRISPR-Cas12c1 system
Nucleic Acids Res. 50 11820 11833 (2022)
DOI: 10.1093/nar/gkac987
Primary Citation of related structures
7VYX