7VXQ image
Entry Detail
PDB ID:
7VXQ
Keywords:
Title:
The Carbon Monoxide Complex of [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-11-13
Release Date:
2022-02-09
Method Details:
Experimental Method:
Resolution:
1.77 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:[NiFe]-hydrogenase 2 large subunit
Chain IDs:A, C
Chain Length:552
Number of Molecules:2
Biological Source:Citrobacter sp. S-77
Polymer Type:polypeptide(L)
Description:NiFe hydrogenase
Chain IDs:B, D
Chain Length:335
Number of Molecules:2
Biological Source:Citrobacter sp. S-77
Primary Citation
Structural and spectroscopic characterization of CO inhibition of [NiFe]-hydrogenase from Citrobacter sp. S-77.
Acta Crystallogr.,Sect.F 78 66 74 (2022)
PMID: 35102895 DOI: 10.1107/S2053230X22000188

Abstact

Hydrogenases catalyze the reversible oxidation of H2. Carbon monoxide (CO) is known to be a competitive inhibitor of O2-sensitive [NiFe]-hydrogenases. Although the activities of some O2-tolerant [NiFe]-hydrogenases are unaffected by CO, the partially O2-tolerant [NiFe]-hydrogenase from Citrobacter sp. S-77 (S77-HYB) is inhibited by CO. In this work, the CO-bound state of S77-HYB was characterized by activity assays, spectroscopic techniques and X-ray crystallography. Electron paramagnetic resonance spectroscopy showed a diamagnetic Ni2+ state, and Fourier-transform infrared spectroscopy revealed the stretching vibration of the exogenous CO ligand. The crystal structure determined at 1.77 Å resolution revealed that CO binds weakly to the nickel ion in the Ni-Fe active site of S77-HYB. These results suggest a positive correlation between O2 and CO tolerance in [NiFe]-hydrogenases.

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