7VR1 image
Deposition Date 2021-10-21
Release Date 2022-10-26
Last Version Date 2025-06-25
Entry Detail
PDB ID:
7VR1
Keywords:
Title:
Cryo-EM structure of the ATP-binding cassette sub-family D member 1 from Homo sapiens
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP-binding cassette sub-family D member 1
Gene (Uniprot):ABCD1
Chain IDs:A (auth: B), B (auth: A)
Chain Length:745
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural and functional insights of the human peroxisomal ABC transporter ALDP.
Elife 11 ? ? (2022)
PMID: 36374178 DOI: 10.7554/eLife.75039

Abstact

Adrenoleukodystrophy protein (ALDP) is responsible for the transport of very-long-chain fatty acids (VLCFAs) and corresponding CoA-esters across the peroxisomal membrane. Dysfunction of ALDP leads to peroxisomal metabolic disorder exemplified by X-linked adrenoleukodystrophy (ALD). Hundreds of ALD-causing mutations have been identified on ALDP. However, the pathogenic mechanisms of these mutations are restricted to clinical description due to limited structural and biochemical characterization. Here we report the cryo-electron microscopy structure of human ALDP with nominal resolution at 3.4 Å. ALDP exhibits a cytosolic-facing conformation. Compared to other lipid ATP-binding cassette transporters, ALDP has two substrate binding cavities formed by the transmembrane domains. Such structural organization may be suitable for the coordination of VLCFAs. Based on the structure, we performed integrative analysis of the cellular trafficking, protein thermostability, ATP hydrolysis, and the transport activity of representative mutations. These results provide a framework for understanding the working mechanism of ALDP and pathogenic roles of disease-associated mutations.

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Primary Citation of related structures