7VPW image
Deposition Date 2021-10-18
Release Date 2022-04-20
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7VPW
Title:
Crystal structure of Transportin-1 in complex with BAP1 PY-NLS (residues 706-724)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.76 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 2 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transportin-1
Gene (Uniprot):TNPO1
Chain IDs:B (auth: A)
Chain Length:870
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BRCA1-associated protein 1 (BAP1)
Chain IDs:A (auth: B)
Chain Length:19
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Tumor suppressor BAP1 nuclear import is governed by transportin-1.
J.Cell Biol. 221 ? ? (2022)
PMID: 35446349 DOI: 10.1083/jcb.202201094

Abstact

Subcellular localization of the deubiquitinating enzyme BAP1 is deterministic for its tumor suppressor activity. While the monoubiquitination of BAP1 by an atypical E2/E3-conjugated enzyme UBE2O and BAP1 auto-deubiquitination are known to regulate its nuclear localization, the molecular mechanism by which BAP1 is imported into the nucleus has remained elusive. Here, we demonstrated that transportin-1 (TNPO1, also known as Karyopherin β2 or Kapβ2) targets an atypical C-terminal proline-tyrosine nuclear localization signal (PY-NLS) motif of BAP1 and serves as the primary nuclear transporter of BAP1 to achieve its nuclear import. TNPO1 binding dissociates dimeric BAP1 and sequesters the monoubiquitination sites flanking the PY-NLS of BAP1 to counteract the function of UBE2O that retains BAP1 in the cytosol. Our findings shed light on how TNPO1 regulates the nuclear import, self-association, and monoubiquitination of BAP1 pertinent to oncogenesis.

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Primary Citation of related structures