7VMD image
Deposition Date 2021-10-08
Release Date 2022-08-24
Last Version Date 2024-11-06
Entry Detail
PDB ID:
7VMD
Keywords:
Title:
Crystal structure of a hydrolases Ple628 from marine microbial consortium
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.69 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:hydrolase Ple628
Chain IDs:A
Chain Length:293
Number of Molecules:1
Biological Source:unclassified Marinobacter
Ligand Molecules
Primary Citation
Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium.
Front Bioeng Biotechnol 10 930140 930140 (2022)
PMID: 35935485 DOI: 10.3389/fbioe.2022.930140

Abstact

Polybutylene adipate terephthalate (PBAT) is a biodegradable alternative to polyethylene and can be broadly used in various applications. These polymers can be degraded by hydrolases of terrestrial and aquatic origin. In a previous study, we identified tandem PETase-like hydrolases (Ples) from the marine microbial consortium I1 that were highly expressed when a PBAT blend was supplied as the only carbon source. In this study, the tandem Ples, Ple628 and Ple629, were recombinantly expressed and characterized. Both enzymes are mesophilic and active on a wide range of oligomers. The activities of the Ples differed greatly when model substrates, PBAT-modified polymers or PET nanoparticles were supplied. Ple629 was always more active than Ple628. Crystal structures of Ple628 and Ple629 revealed a structural similarity to other PETases and can be classified as member of the PETases IIa subclass, α/β hydrolase superfamily. Our results show that the predicted functions of Ple628 and Ple629 agree with the bioinformatic predictions, and these enzymes play a significant role in the plastic degradation by the consortium.

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