ISDA: 7VHY

Deposition Date 2021-09-24

Release Date 2022-04-27

Last Version Date 2023-11-29

Entry Detail

PDB ID:

7VHY

Keywords:

TRANSFERASE

Title:

Crystal structure of EP300 HAT domain in complex with compound (+)-3

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.30 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Histone acetyltransferase p300
Gene (Uniprot):EP300
Mutagens:Y1467E
Chain IDs:A, B
Chain Length:454
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q09472 Pfam ID:PF06001, PF08214 EC:2.3.1.48

Ligand Molecules

6QI

Primary Citation

Discovery of EP300/CBP histone acetyltransferase inhibitors through scaffold hopping of 1,4-oxazepane ring.

Kanada, R, Kagoshima, Y, Asano, M, Suzuki, T, Murata, T, Haruta, M, Takahashi, M, Ubukata, O, Hashimoto, K, Obata, K, Kihara, K, Kuroha, M, Banjo, T, Togashi, N, Sato, K, Yamamoto, Y, Suzuki, K, Isoyama, T, Tominaga, Y, Higuchi, S, Naito, H.Show

Bioorg.Med.Chem.Lett. 66 128726 128726 (2022)

PMID: 35413416 DOI: 10.1016/j.bmcl.2022.128726

Abstact

EP300 and its paralog CBP play an important role in post-translational modification as histone acetyltransferases (HATs). EP300/CBP inhibition has been gaining attention as an anticancer treatment target in recent years. Herein, we describe the identification of a novel, highly selective EP300/CBP inhibitor, compound 11 (DS17701585), by scaffold hopping and structure-based optimization of a high-throughput screening hit 1. Compound 11 (DS17701585) shows dose-dependent inhibition of SRY-box transcription factor 2 (SOX2) mRNA expression in a human lung squamous cell carcinoma cell line LK2-xenografted mouse model.

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Primary Citation of related structures

Abstact

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