7VG9 image
Deposition Date 2021-09-15
Release Date 2021-10-27
Last Version Date 2023-11-29
Entry Detail
PDB ID:
7VG9
Keywords:
Title:
Crystal structure of phosphotransbutyrylase from Clostridium acetobutylicum
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.91 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Phosphate butyryltransferase
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:321
Number of Molecules:8
Biological Source:Clostridium acetobutylicum
Ligand Molecules
Primary Citation
Crystal structure and molecular mechanism of phosphotransbutyrylase from Clostridium acetobutylicum .
J Microbiol Biotechnol. 31 1 9 (2021)
PMID: 34584034 DOI: 10.4014/jmb.2109.09036

Abstact

Acetone-butanol-ethanol (ABE) fermentation by the anaerobic bacterium Clostridium acetobutylicum has been considered a promising process of industrial biofuel production. Phosphotransbutyrylase (phosphate butyryltransferase, PTB) plays a crucial role in butyrate metabolism by catalyzing the reversible conversion of butyryl-CoA into butyryl phosphate. Here, we report the crystal structure of PTB from the Clostridial host for ABE fermentation, C. acetobutylicum, (CaPTB) at a 2.9 Å resolution. The overall structure of the CaPTB monomer is quite similar to those of other acyltransferases, with some regional structural differences. The monomeric structure of CaPTB consists of two distinct domains, the N- and C-terminal domains. The active site cleft was formed at the interface between the two domains. Interestingly, the crystal structure of CaPTB contained eight molecules per asymmetric unit, forming an octamer, and the size-exclusion chromatography experiment also suggested that the enzyme exists as an octamer in solution. The structural analysis of CaPTB identifies the substrate binding mode of the enzyme and comparisons with other acyltransferase structures lead us to speculate that the enzyme undergoes a conformational change upon binding of its substrate.

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Primary Citation of related structures
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