7VCF image
Deposition Date 2021-09-02
Release Date 2022-11-30
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7VCF
Keywords:
Title:
Cryo-EM structure of Chlamydomonas TOC-TIC supercomplex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tic214
Gene (Uniprot):ycf78
Chain IDs:A
Chain Length:1995
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc75
Gene (Uniprot):CHLRE_03g175200v5
Chain IDs:B
Chain Length:798
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc52
Gene (Uniprot):CHLRE_12g532100v5
Chain IDs:C
Chain Length:477
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic13
Gene (Uniprot):CHLRE_12g527550v5
Chain IDs:D
Chain Length:124
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc120
Gene (Uniprot):CHLRE_17g734300v5
Chain IDs:E (auth: F)
Chain Length:967
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc34
Gene (Uniprot):TOC34
Chain IDs:F (auth: G)
Chain Length:397
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:YlmG
Gene (Uniprot):CHLRE_02g080250v5
Chain IDs:G (auth: H)
Chain Length:187
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc39
Gene (Uniprot):CHLRE_17g722750v5
Chain IDs:H (auth: I)
Chain Length:363
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Toc10
Gene (Uniprot):CHLRE_02g142246v5
Chain IDs:I (auth: K)
Chain Length:98
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic12
Gene (Uniprot):CHLRE_09g402100v5
Chain IDs:J (auth: M)
Chain Length:127
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Unknown fragment
Chain IDs:K (auth: N)
Chain Length:18
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic35
Gene (Uniprot):CHLRE_03g164700v5
Chain IDs:L (auth: O)
Chain Length:329
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic56
Gene (Uniprot):CHLRE_17g727100v5
Chain IDs:M (auth: Q)
Chain Length:244
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic100
Gene (Uniprot):CHLRE_06g300550v5
Chain IDs:N (auth: T)
Chain Length:955
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Tic20-Venus-Flag
Gene (Uniprot):CHLRE_08g379650v5
Chain IDs:O (auth: W)
Chain Length:532
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP B SER modified residue
TPO A THR modified residue
Primary Citation
Structure of a TOC-TIC supercomplex spanning two chloroplast envelope membranes.
Cell 185 4788 4800.e13 (2022)
PMID: 36413996 DOI: 10.1016/j.cell.2022.10.030

Abstact

The TOC and TIC complexes are essential translocons that facilitate the import of the nuclear genome-encoded preproteins across the two envelope membranes of chloroplast, but their exact molecular identities and assembly remain unclear. Here, we report a cryoelectron microscopy structure of TOC-TIC supercomplex from Chlamydomonas, containing a total of 14 identified components. The preprotein-conducting pore of TOC is a hybrid β-barrel co-assembled by Toc120 and Toc75, while the potential translocation path of TIC is formed by transmembrane helices from Tic20 and YlmG, rather than a classic model of Tic110. A rigid intermembrane space (IMS) scaffold bridges two chloroplast membranes, and a large hydrophilic cleft on the IMS scaffold connects TOC and TIC, forming a pathway for preprotein translocation. Our study provides structural insights into the TOC-TIC supercomplex composition, assembly, and preprotein translocation mechanism, and lays a foundation to interpret the evolutionary conservation and diversity of this fundamental translocon machinery.

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