7VBQ image
Entry Detail
PDB ID:
7VBQ
Keywords:
Title:
Heterodimer structure of Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxIJ
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-09-01
Release Date:
2022-04-20
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxJ
Chain IDs:A
Chain Length:318
Number of Molecules:1
Biological Source:Talaromyces purpureogenus
Polymer Type:polypeptide(L)
Description:Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
Chain IDs:B
Chain Length:282
Number of Molecules:1
Biological Source:Talaromyces purpureogenus
Primary Citation
Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc. 143 21425 21432 (2021)
PMID: 34881885 DOI: 10.1021/jacs.1c11548

Abstact

Talaromyolides (1-6) are a group of unusual 6/6/6/6/6/6 hexacyclic meroterpenoids with (3R)-6-hydroxymellein and 4,5-seco-drimane substructures, isolated from the marine fungus Talaromyces purpureogenus. We have identified the biosynthetic gene cluster tlxA-J by heterologous expression in Aspergillus, in vitro enzyme assays, and CRISPR-Cas9-based gene inactivation. Remarkably, the heterodimer of non-heme iron (NHI) enzymes, TlxJ-TlxI, catalyzes three steps of oxidation including a key reaction, hydroxylation at C-5 and C-9 of 12, the intermediate with 3-ketohydroxydrimane scaffold, to facilitate a retro-aldol reaction, leading to the construction of the 4,5-secodrimane skeleton and characteristic ketal scaffold of 1-6. The products of TlxJ-TlxI, 1 and 4, were further hydroxylated at C-4'β by another NHI heterodimer, TlxA-TlxC, and acetylated by TlxB to yield the final products, 3 and 6. The X-ray structural analysis coupled with site-directed mutagenesis provided insights into the heterodimer TlxJ-TlxI formation and its catalysis. This is the first report to show that two NHI proteins form a heterodimer for catalysis and utilizes a novel methodology to create functional oxygenase structures in secondary metabolite biosynthesis.

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