ISDA: 7V9X

Deposition Date 2021-08-27

Release Date 2022-08-31

Last Version Date 2025-07-02

Entry Detail

PDB ID:

7V9X

Keywords:

TRANSFERASE/RNA BINDING PROTEIN/DNA/RNA

Title:

Cryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstrom

Biological Source:

Source Organism(s):

Escherichia coli (Taxon ID: 562)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.82 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:RNA-directed DNA polymerase from retron EC86
Gene (Uniprot):ret
Chain IDs:A, F (auth: B)
Chain Length:330
Number of Molecules:2
Biological Source:Escherichia coli

UniProt ID:P23070 Pfam ID:PF00078

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:retron St85 family effector protein
Chain IDs:B (auth: C)
Chain Length:307
Number of Molecules:1
Biological Source:Escherichia coli

UniProt ID:P0DV88

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (105-MER)
Chain IDs:C (auth: D), G
Chain Length:105
Number of Molecules:2
Biological Source:Escherichia coli

Polymer Type:polyribonucleotide
Molecule:RNA (81-MER)
Chain IDs:D (auth: E), H
Chain Length:81
Number of Molecules:2
Biological Source:Escherichia coli

Polymer Type:polyribonucleotide
Molecule:RNA (14-MER)
Chain IDs:E (auth: F), I
Chain Length:14
Number of Molecules:2
Biological Source:Escherichia coli

Ligand Molecules

Primary Citation

Structural insight into anti-phage Retron-Ec86 complex

Wang, T.J, Guan, Z.Y, Zou, T.T.Show

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Primary Citation of related structures

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