7UZT image
Deposition Date 2022-05-09
Release Date 2022-11-09
Last Version Date 2024-05-22
Entry Detail
PDB ID:
7UZT
Keywords:
Title:
Crystal structure of the human astrovirus MLB1 capsid protein spike domain at 1.86-A resolution
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Capsid polyprotein VP90
Chain IDs:A, B, C
Chain Length:266
Number of Molecules:3
Biological Source:Astrovirus MLB1
Primary Citation
Structure of the divergent human astrovirus MLB capsid spike.
Structure 30 1573 1581.e3 (2022)
PMID: 36417907 DOI: 10.1016/j.str.2022.10.010

Abstact

Despite their worldwide prevalence and association with human disease, the molecular bases of human astrovirus (HAstV) infection and evolution remain poorly characterized. Here, we report the structure of the capsid protein spike of the divergent HAstV MLB clade (HAstV MLB). While the structure shares a similar folding topology with that of classical-clade HAstV spikes, it is otherwise strikingly different. We find no evidence of a conserved receptor-binding site between the MLB and classical HAstV spikes, suggesting that MLB and classical HAstVs utilize different receptors for host-cell attachment. We provide evidence for this hypothesis using a novel HAstV infection competition assay. Comparisons of the HAstV MLB spike structure with structures predicted from its sequence reveal poor matches, but template-based predictions were surprisingly accurate relative to machine-learning-based predictions. Our data provide a foundation for understanding the mechanisms of infection by diverse HAstVs and can support structure determination in similarly unstudied systems.

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Primary Citation of related structures