ISDA: 7UZG

Deposition Date 2022-05-09

Release Date 2023-11-22

Last Version Date 2023-11-22

Entry Detail

PDB ID:

7UZG

Keywords:

PROTON TRANSPORT

Title:

Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1

Biological Source:

Source Organism(s):

Legionella pneumophila (Taxon ID: 446)
Rattus norvegicus (Taxon ID: 10116)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.70 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ATPase H+-transporting V1 subunit A
Gene (Uniprot):Atp6v1a
Chain IDs:A, B, C
Chain Length:838
Number of Molecules:3
Biological Source:Rattus norvegicus

UniProt ID:D4A133 Pfam ID:PF02874, PF16886, PF00006, PF22919

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit B, brain isoform
Gene (Uniprot):Atp6v1b2
Chain IDs:D, E, F
Chain Length:351
Number of Molecules:3
Biological Source:Rattus norvegicus

UniProt ID:P62815 Pfam ID:PF02874, PF00006, PF22919

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit C 1
Gene (Uniprot):Atp6v1c1
Chain IDs:G
Chain Length:155
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q5FVI6 Pfam ID:PF03223

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ATPase H+-transporting V1 subunit D
Gene (Uniprot):Atp6v1d
Chain IDs:H
Chain Length:155
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q6P503 Pfam ID:PF01813

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit E 1
Gene (Uniprot):Atp6v1e1
Chain IDs:I, J, K
Chain Length:226
Number of Molecules:3
Biological Source:Rattus norvegicus

UniProt ID:Q6PCU2 Pfam ID:PF01991

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit F
Gene (Uniprot):Atp6v1f
Chain IDs:L
Chain Length:119
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:P50408 Pfam ID:PF01990

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit G
Gene (Uniprot):Atp6v1g1
Chain IDs:M, N, O
Chain Length:155
Number of Molecules:3
Biological Source:Rattus norvegicus

UniProt ID:B2GUV5 Pfam ID:PF03179

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Legionella pneumophila effector SidK
Gene (Uniprot):lpg0968
Chain IDs:P (auth: Q), Q (auth: R), R (auth: S)
Chain Length:301
Number of Molecules:3
Biological Source:Legionella pneumophila

UniProt ID:Q5ZWW6

Polymer Type:polypeptide(L)
Molecule:Nuclear receptor coactivator 7
Chain IDs:S (auth: T)
Chain Length:171
Number of Molecules:1
Biological Source:Rattus norvegicus

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 116 kDa subunit a isoform 1
Gene (Uniprot):Atp6v0a1
Chain IDs:T (auth: a)
Chain Length:838
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:P25286 Pfam ID:PF01496

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:ATPase, H+ transporting, V0 subunit B (Predicted), isoform CRA_a
Gene (Uniprot):Atp6v0b
Chain IDs:U (auth: b)
Chain Length:617
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:B0K022 Pfam ID:PF00137

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit S1
Gene (Uniprot):Atp6ap1
Chain IDs:V (auth: c)
Chain Length:463
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:O54715 Pfam ID:PF05827, PF20520

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit
Gene (Uniprot):Atp6v0d1
Chain IDs:W (auth: d)
Chain Length:351
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q5M7T6 Pfam ID:PF01992

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase subunit e 2
Gene (Uniprot):Atp6v0e2
Chain IDs:X (auth: e)
Chain Length:511
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q5EB76 Pfam ID:PF05493

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ribonuclease K
Gene (Uniprot):Rnasek
Chain IDs:Y (auth: f)
Chain Length:511
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:D3ZIM6

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:V-type proton ATPase 16 kDa proteolipid subunit
Gene (Uniprot):Atp6v0c
Chain IDs:Z (auth: g), AA (auth: h), BA (auth: i), CA (auth: j), DA (auth: k), EA (auth: l), FA (auth: m), GA (auth: n), HA (auth: o)
Chain Length:155
Number of Molecules:9
Biological Source:Rattus norvegicus

UniProt ID:P63081 Pfam ID:PF00137

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Renin receptor
Gene (Uniprot):Atp6ap2
Chain IDs:IA (auth: p)
Chain Length:350
Number of Molecules:1
Biological Source:Rattus norvegicus

UniProt ID:Q6AXS4 Pfam ID:PF07850, PF25294

Ligand Molecules

ADP

Primary Citation

Structure of V-ATPase with NCOA7B

Abbas, Y.M, Rubinstein, J.L.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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