ISDA

Deposition Date 2022-04-08

Release Date 2022-12-14

Last Version Date 2023-10-25

Entry Detail

PDB ID:

7UMW

Keywords:

ANTIBIOTIC

Title:

Crystal structure of E. Coli FabI in complex with NAD and Fabimycin ((S,E)-3-(7-amino-8-oxo-6,7,8,9-tetrahydro-5H-pyrido[2,3-b]azepin-3-yl)-N-methyl-N-((3-methylbenzofuran-2-yl)methyl)acrylamide)

Biological Source:

Source Organism:

Escherichia coli str. K-12 substr. MG1655 (Taxon ID: 511145)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.54 Å

R-Value Free:

0.24

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 61 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Enoyl-[acyl-carrier-protein] reductase [NADH] FabI
Gene (Uniprot):fabI
Chain IDs:A, B
Chain Length:266
Number of Molecules:2
Biological Source:Escherichia coli str. K-12 substr. MG1655

UniProt ID:P0AEK4 Pfam ID:PF13561 EC:1.3.1.9

Ligand Molecules

NAD

NUC

Primary Citation

An Iterative Approach Guides Discovery of the FabI Inhibitor Fabimycin, a Late-Stage Antibiotic Candidate with In Vivo Efficacy against Drug-Resistant Gram-Negative Infections

Parker, E.N, Cain, B.N, Hajian, B, Ulrich, R.J, Geddes, E.J, Barkho, S, Lee, H.Y, Williams, J.D, Raynor, M, Caridha, D, Zaino, A, Rohde, J.M, Zak, M, Shekhar, M, Munoz, K.A, Rzasa, K.M, Temple, E.R, Hunt, D, Jin, X, Vuong, C, Pannone, K, Kelly, A.M, Mulligan, M.P, Lee, K.K, Lau, G.W, Hung, D.T, Hergenrother, P.J, Parker, E.N, Cain, B.N, Hajian, B, Ulrich, R.J, Geddes, E.J, Barkho, S, Lee, H.Y, Williams, J.D, Raynor, M, Caridha, D, Zaino, A, Shekhar, M, Munoz, K.A, Rzasa, K.M, Temple, E.R, Hunt, D, Jin, X, Vuong, C, Pannone, K, Kelly, A.M, Mulligan, M.P, Lee, K.K, Lau, G.W, Hung, D.T, Hergenrother, P.J.Show

Acs Cent.Sci. 8 1362 1362 (2022)

PMID: 36188352 DOI: 10.1021/acscentsci.2c00969

Abstact

[This corrects the article DOI: 10.1021/acscentsci.2c00598.].

Legend

Protein

Chemical

Disease

Primary Citation of related structures