7UMM image
Entry Detail
PDB ID:
7UMM
EMDB ID:
Keywords:
Title:
H1 Solomon Islands 2006 hemagglutinin in complex with Ab109
Biological Source:
PDB Version:
Deposition Date:
2022-04-07
Release Date:
2022-11-23
Method Details:
Experimental Method:
Resolution:
3.36 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hemagglutinin
Chain IDs:A, B, C
Chain Length:523
Number of Molecules:3
Biological Source:Influenza A virus (A/Solomon Islands/3/2006(H1N1))
Polymer Type:polypeptide(L)
Description:ab109 Fab heavy chain
Chain IDs:D (auth: H), E (auth: I), F (auth: J)
Chain Length:218
Number of Molecules:3
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:ab109 Fab light chain
Chain IDs:G (auth: L), H (auth: M), I (auth: N)
Chain Length:218
Number of Molecules:3
Biological Source:Mus musculus
Ligand Molecules
Primary Citation

Abstact

Pathogens evade host humoral responses by accumulating mutations in surface antigens. While variable, there are conserved regions that cannot mutate without compromising fitness. Antibodies targeting these conserved epitopes are often broadly protective but remain minor components of the repertoire. Rational immunogen design leverages a structural understanding of viral antigens to modulate humoral responses to favor these responses. Here, we report an epitope-enriched immunogen presenting a higher copy number of the influenza hemagglutinin (HA) receptor-binding site (RBS) epitope relative to other B cell epitopes. Immunization in a partially humanized murine model imprinted with an H1 influenza shows H1-specific serum and >99% H1-specific B cells being RBS-directed. Single B cell analyses show a genetically restricted response that structural analysis defines as RBS-directed antibodies engaging the RBS with germline-encoded contacts. These data show how epitope enrichment expands B cell responses toward conserved epitopes and advances immunogen design approaches for next-generation viral vaccines.

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Primary Citation of related structures