7UIN image
Deposition Date 2022-03-29
Release Date 2022-11-23
Last Version Date 2024-06-12
Entry Detail
PDB ID:
7UIN
Title:
CryoEM Structure of an Group II Intron Retroelement
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (37-MER)
Chain IDs:C (auth: A)
Chain Length:37
Number of Molecules:1
Biological Source:[Eubacterium] rectale
Polymer Type:polyribonucleotide
Molecule:E.r IIC Intron
Chain IDs:A (auth: B)
Chain Length:638
Number of Molecules:1
Biological Source:[Eubacterium] rectale
Polymer Type:polypeptide(L)
Molecule:Group II intron reverse transcriptase/maturase
Gene (Uniprot):ltrA_2
Chain IDs:B (auth: D)
Chain Length:427
Number of Molecules:1
Biological Source:[Eubacterium] rectale
Primary Citation
Structures of a mobile intron retroelement poised to attack its structured DNA target
Science 378 627 634 (2022)
PMID: 36356138 DOI: 10.1126/science.abq2844

Abstact

Group II introns are ribozymes that catalyze their self-excision and function as retroelements that invade DNA. As retrotransposons, group II introns form ribonucleoprotein (RNP) complexes that roam the genome, integrating by reversal of forward splicing. Here we show that retrotransposition is achieved by a tertiary complex between a structurally elaborate ribozyme, its protein mobility factor, and a structured DNA substrate. We solved cryo-electron microscopy structures of an intact group IIC intron-maturase retroelement that was poised for integration into a DNA stem-loop motif. By visualizing the RNP before and after DNA targeting, we show that it is primed for attack and fits perfectly with its DNA target. This study reveals design principles of a prototypical retroelement and reinforces the hypothesis that group II introns are ancient elements of genetic diversification.

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Primary Citation of related structures