7TRI image
Deposition Date 2022-01-28
Release Date 2023-08-02
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7TRI
Title:
Human antibody S8V1-172 in complex with the influenza hemagglutinin head domain of A/Sydney/05/1997(H3N2)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.60 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 32 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Chain IDs:A (auth: B)
Chain Length:294
Number of Molecules:1
Biological Source:Influenza A virus (A/Sydney/5/1997(H3N2))
Polymer Type:polypeptide(L)
Molecule:S8V1-172 Fab kappa light chain
Chain IDs:B (auth: Y)
Chain Length:213
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:S8V1-172 Fab heavy chain
Chain IDs:C (auth: Z)
Chain Length:234
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A new class of antibodies that overcomes a steric barrier to cross-group neutralization of influenza viruses.
Plos Biol. 21 e3002415 e3002415 (2023)
PMID: 38127922 DOI: 10.1371/journal.pbio.3002415

Abstact

Antibody titers that inhibit the influenza virus hemagglutinin (HA) from engaging its receptor are the accepted correlate of protection from infection. Many potent antibodies with broad, intra-subtype specificity bind HA at the receptor binding site (RBS). One barrier to broad H1-H3 cross-subtype neutralization is an insertion (133a) between positions 133 and 134 on the rim of the H1 HA RBS. We describe here a class of antibodies that overcomes this barrier. These genetically unrestricted antibodies are abundant in the human B cell memory compartment. Analysis of the affinities of selected members of this class for historical H1 and H3 isolates suggest that they were elicited by H3 exposure and broadened or diverted by later exposure(s) to H1 HA. RBS mutations in egg-adapted vaccine strains cause the new H1 specificity of these antibodies to depend on the egg adaptation. The results suggest that suitable immunogens might elicit 133a-independent, H1-H3 cross neutralization by RBS-directed antibodies.

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Primary Citation of related structures
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