7TQT image
Entry Detail
PDB ID:
7TQT
EMDB ID:
Title:
Coxsackievirus A21 capsid subdomain in complex with mouse polyclonal antibody pAbC-5
Biological Source:
PDB Version:
Deposition Date:
2022-01-27
Release Date:
2023-01-04
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:pAbC-5 heavy chain
Chain IDs:B (auth: H)
Chain Length:108
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:pAbC-5 light chain
Chain IDs:A (auth: L)
Chain Length:69
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:VP1
Chain IDs:C (auth: a), G (auth: e), K (auth: i), O (auth: m), S (auth: q)
Chain Length:298
Number of Molecules:5
Biological Source:Coxsackievirus A21
Polymer Type:polypeptide(L)
Description:VP2
Chain IDs:D (auth: b), H (auth: f), L (auth: j), P (auth: n), T (auth: r)
Chain Length:272
Number of Molecules:5
Biological Source:Coxsackievirus A21
Polymer Type:polypeptide(L)
Description:VP3
Chain IDs:E (auth: c), I (auth: g), M (auth: k), Q (auth: o), U (auth: s)
Chain Length:240
Number of Molecules:5
Biological Source:Coxsackievirus A21
Polymer Type:polypeptide(L)
Description:VP4
Chain IDs:F (auth: d), J (auth: h), N (auth: l), R (auth: p), V (auth: t)
Chain Length:69
Number of Molecules:5
Biological Source:Coxsackievirus A21
Ligand Molecules
Primary Citation
High-resolution structural analysis of enterovirus-reactive polyclonal antibodies in complex with whole virions.
Pnas Nexus 1 pgac253 pgac253 (2022)
PMID: 36712368 DOI: 10.1093/pnasnexus/pgac253

Abstact

Non-polio enteroviruses (NPEVs) cause serious illnesses in young children and neonates, including aseptic meningitis, encephalitis, and inflammatory muscle disease, among others. While over 100 serotypes have been described to date, vaccine only exists for EV-A71. Efforts toward rationally designed pan-NPEV vaccines would greatly benefit from structural biology methods for rapid and comprehensive evaluation of vaccine candidates and elicited antibody responses. Toward this goal, we introduced a cryo-electron-microscopy-based approach for structural analysis of virus- or vaccine-elicited polyclonal antibodies (pAbs) in complex with whole NPEV virions. We demonstrated the feasibility using coxsackievirus A21 and reconstructed five structurally distinct pAbs bound to the virus. The pAbs targeted two immunodominant epitopes, one overlapping with the receptor binding site. These results demonstrate that our method can be applied to map broad-spectrum polyclonal immune responses against intact virions and define potentially cross-reactive epitopes.

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Primary Citation of related structures