7TE1 image
Entry Detail
PDB ID:
7TE1
Title:
SARS-CoV-2 Receptor Binding Domain in Complex with Ab17
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-01-03
Release Date:
2022-03-30
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.34
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ab17 heavy chain
Chain IDs:A (auth: C), C (auth: H)
Chain Length:223
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Spike protein S1
Chain IDs:E (auth: D), F (auth: E)
Chain Length:211
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Ab17 light chain
Chain IDs:B (auth: F), D (auth: L)
Chain Length:214
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Rationally designed immunogens enable immune focusing following SARS-CoV-2 spike imprinting.
Cell Rep 38 110561 110561 (2022)
PMID: 35303475 DOI: 10.1016/j.celrep.2022.110561

Abstact

Eliciting antibodies to surface-exposed viral glycoproteins can generate protective responses that control and prevent future infections. Targeting conserved sites may reduce the likelihood of viral escape and limit the spread of related viruses with pandemic potential. Here we leverage rational immunogen design to focus humoral responses on conserved epitopes. Using glycan engineering and epitope scaffolding in boosting immunogens, we focus murine serum antibody responses to conserved receptor binding motif (RBM) and receptor binding domain (RBD) epitopes following severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike imprinting. Although all engineered immunogens elicit a robust SARS-CoV-2-neutralizing serum response, RBM-focusing immunogens exhibit increased potency against related sarbecoviruses, SARS-CoV, WIV1-CoV, RaTG13-CoV, and SHC014-CoV; structural characterization of representative antibodies defines a conserved epitope. RBM-focused sera confer protection against SARS-CoV-2 challenge. Thus, RBM focusing is a promising strategy to elicit breadth across emerging sarbecoviruses without compromising SARS-CoV-2 protection. These engineering strategies are adaptable to other viral glycoproteins for targeting conserved epitopes.

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Primary Citation of related structures