7TBD image
Entry Detail
PDB ID:
7TBD
Keywords:
Title:
Crystal structure of Plasmepsin X from Plasmodium vivax in complex with WM382
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-12-21
Release Date:
2022-05-04
Method Details:
Experimental Method:
Resolution:
2.22 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Plasmepsin X
Chain IDs:A, B
Chain Length:379
Number of Molecules:2
Biological Source:Plasmodium vivax
Primary Citation
Basis for drug selectivity of plasmepsin IX and X inhibition in Plasmodium falciparum and vivax.
Structure 30 947 ? (2022)
PMID: 35460613 DOI: 10.1016/j.str.2022.03.018

Abstact

Plasmepsins IX (PMIX) and X (PMX) are essential aspartyl proteases for Plasmodium spp. egress, invasion, and development. WM4 and WM382 inhibit PMIX and PMX in Plasmodium falciparum and P. vivax. WM4 inhibits PMX, while WM382 is a dual inhibitor of PMIX and PMX. To understand their function, we identified protein substrates. Enzyme kinetic and structural analyses identified interactions responsible for drug specificity. PMIX and PMX have similar substrate specificity; however, there are distinct differences for peptide and protein substrates. Differences in WM4 and WM382 binding for PMIX and PMX map to variations in the S' region and engagement of the active site S3 pocket. Structures of PMX reveal interactions and mechanistic detail of drug binding important for development of clinical candidates against these targets.

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Primary Citation of related structures