7TA8 image
Entry Detail
PDB ID:
7TA8
Keywords:
Title:
NMR structure of crosslinked cyclophilin A
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-12-20
Release Date:
2022-06-01
Method Details:
Experimental Method:
Conformers Calculated:
200
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Peptidyl-prolyl cis-trans isomerase A
Chain IDs:A
Chain Length:165
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The Magic of Linking Rings: Discovery of a Unique Photoinduced Fluorescent Protein Crosslink.
J.Am.Chem.Soc. 144 10809 10816 (2022)
PMID: 35574633 DOI: 10.1021/jacs.2c02054

Abstact

Fluorosubstituted tryptophans serve as valuable probes for fluorescence and nuclear magnetic resonance (NMR) studies of proteins. Here, we describe an unusual photoreactivity introduced by replacing the single tryptophan in cyclophilin A with 7-fluoro-tryptophan. UV exposure at 282 nm defluorinates 7-fluoro-tryptophan and crosslinks it to a nearby phenylalanine, generating a bright fluorophore. The crosslink-containing fluorescent protein possesses a large quantum yield of ∼0.40 with a fluorescence lifetime of 2.38 ns. The chemical nature of the crosslink and the three-dimensional protein structure were determined by mass spectrometry and NMR spectroscopy. To the best of our knowledge, this is the first report of a Phe-Trp crosslink in a protein. Our finding may break new ground for developing novel fluorescence probes and for devising new strategies to exploit aromatic crosslinks in proteins.

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Primary Citation of related structures