7T1Y image
Deposition Date 2021-12-02
Release Date 2022-02-16
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7T1Y
Keywords:
Title:
Structure of the Fbw7-Skp1-MycCdegron complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.26
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
I 41 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:S-phase kinase-associated protein 1
Gene (Uniprot):SKP1
Chain IDs:A
Chain Length:156
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:F-box/WD repeat-containing protein 7
Gene (Uniprot):FBXW7
Chain IDs:B
Chain Length:457
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Myc proto-oncogene protein C terminal degron
Chain IDs:C
Chain Length:30
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Two diphosphorylated degrons control c-Myc degradation by the Fbw7 tumor suppressor.
Sci Adv 8 eabl7872 eabl7872 (2022)
PMID: 35089787 DOI: 10.1126/sciadv.abl7872

Abstact

c-Myc (hereafter, Myc) is a cancer driver whose abundance is regulated by the SCFFbw7 ubiquitin ligase and proteasomal degradation. Fbw7 binds to a phosphorylated Myc degron centered at threonine 58 (T58), and mutations of Fbw7 or T58 impair Myc degradation in cancers. Here, we identify a second Fbw7 phosphodegron at Myc T244 that is required for Myc ubiquitylation and acts in concert with T58 to engage Fbw7. While Ras-dependent Myc serine 62 phosphorylation (pS62) is thought to stabilize Myc by preventing Fbw7 binding, we find instead that pS62 greatly enhances Fbw7 binding and is an integral part of a high-affinity degron. Crystallographic studies revealed that both degrons bind Fbw7 in their diphosphorylated forms and that the T244 degron is recognized via a unique mode involving Fbw7 arginine 689 (R689), a mutational hotspot in cancers. These insights have important implications for Myc-associated tumorigenesis and therapeutic strategies targeting Myc stability.

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Disease

Primary Citation of related structures