7T1J image
Deposition Date 2021-12-02
Release Date 2022-09-07
Last Version Date 2023-11-15
Entry Detail
PDB ID:
7T1J
Keywords:
Title:
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.96 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ribulose bisphosphate carboxylase
Gene (Uniprot):cbbM
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:460
Number of Molecules:12
Biological Source:Rhodospirillaceae bacterium BRH_c57
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KCX A LYS modified residue
Primary Citation
Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv 8 eadc9440 eadc9440 (2022)
PMID: 36026446 DOI: 10.1126/sciadv.adc9440

Abstact

Oligomerization is a core structural feature that defines the form and function of many proteins. Most proteins form molecular complexes; however, there remains a dearth of diversity-driven structural studies investigating the evolutionary trajectory of these assemblies. Ribulose-1,5-bisphosphate carboxylase-oxygenase (RuBisCO) is one such enzyme that adopts multiple assemblies, although the origins and distribution of its different oligomeric states remain cryptic. Here, we retrace the evolution of ancestral and extant form II RuBisCOs, revealing a complex and diverse history of oligomerization. We structurally characterize a newly discovered tetrameric RuBisCO, elucidating how solvent-exposed surfaces can readily adopt new interactions to interconvert or give rise to new oligomeric states. We further use these principles to engineer and demonstrate how changes in oligomerization can be mediated by relatively few mutations. Our findings yield insight into how structural plasticity may give rise to new oligomeric states.

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