7SVS image
Deposition Date 2021-11-19
Release Date 2022-02-16
Last Version Date 2023-10-18
Entry Detail
PDB ID:
7SVS
Keywords:
Title:
Crystal structure analysis of the G73A mutant of Superoxide Dismutase from Trichoderma reesei
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Superoxide dismutase
Gene (Uniprot):TRIREDRAFT_66345
Mutations:G73A
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:212
Number of Molecules:8
Biological Source:Hypocrea jecorina (strain QM6a)
Ligand Molecules
Primary Citation
Unexpected plasticity of the quaternary structure of iron-manganese superoxide dismutases.
J.Struct.Biol. 214 107855 107855 (2022)
PMID: 35390463 DOI: 10.1016/j.jsb.2022.107855

Abstact

Protein 3D structure can be remarkably robust to the accumulation of mutations during evolution. On the other hand, sometimes a single amino acid substitution can be sufficient to generate dramatic and completely unpredictable structural consequences. In an attempt to rationally alter the preferences for the metal ion at the active site of a member of the Iron/Manganese superoxide dismutase family, two examples of the latter phenomenon were identified. Site directed mutants of SOD from Trichoderma reesei were generated and studied crystallographically together with the wild type enzyme. Despite being chosen for their potential impact on the redox potential of the metal, two of the mutations (D150G and G73A) in fact resulted in significant alterations to the protein quaternary structure. The D150G mutant presented alternative inter-subunit contacts leading to a loss of symmetry of the wild type tetramer, whereas the G73A mutation transformed the tetramer into an octamer despite not participating directly in any of the inter-subunit interfaces. We conclude that there is considerable intrinsic plasticity in the Fe/MnSOD fold that can be unpredictably affected by single amino acid substitutions. In much the same way as phenotypic defects at the organism level can reveal much about normal function, so too can such mutations teach us much about the subtleties of protein structure.

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Primary Citation of related structures