7SSB image
Entry Detail
PDB ID:
7SSB
Title:
Co-structure of PKG1 regulatory domain with compound 33
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-11-10
Release Date:
2022-08-24
Method Details:
Experimental Method:
Resolution:
1.40 Å
R-Value Free:
0.22
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:cGMP-dependent protein kinase 1
Mutations:R203S
Chain IDs:A
Chain Length:268
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Optimization and Mechanistic Investigations of Novel Allosteric Activators of PKG1 alpha.
J.Med.Chem. 65 10318 10340 (2022)
PMID: 35878399 DOI: 10.1021/acs.jmedchem.1c02109

Abstact

Activation of PKG1α is a compelling strategy for the treatment of cardiovascular diseases. As the main effector of cyclic guanosine monophosphate (cGMP), activation of PKG1α induces smooth muscle relaxation in blood vessels, lowers pulmonary blood pressure, prevents platelet aggregation, and protects against cardiac stress. The development of activators has been mostly limited to cGMP mimetics and synthetic peptides. Described herein is the optimization of a piperidine series of small molecules to yield activators that demonstrate in vitro phosphorylation of vasodilator-stimulated phosphoprotein as well as antiproliferative effects in human pulmonary arterial smooth muscle cells. Hydrogen/deuterium exchange mass spectrometry experiments with the small molecule activators revealed a mechanism of action consistent with cGMP-induced activation, and an X-ray co-crystal structure with a construct encompassing the regulatory domains illustrated a binding mode in an allosteric pocket proximal to the low-affinity cyclic nucleotide-binding domain.

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Primary Citation of related structures