7SCT image
Deposition Date 2021-09-29
Release Date 2023-03-29
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7SCT
Keywords:
Title:
Crystal Structure of the Tick Evasin EVA-AAM1001 Complexed to Human Chemokine CCL16
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.84 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 4 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Evasin P1243
Chain IDs:A
Chain Length:101
Number of Molecules:1
Biological Source:Amblyomma americanum
Polymer Type:polypeptide(L)
Molecule:C-C motif chemokine 16
Gene (Uniprot):CCL16
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Engineering broad-spectrum inhibitors of inflammatory chemokines from subclass A3 tick evasins.
Nat Commun 14 4204 4204 (2023)
PMID: 37452046 DOI: 10.1038/s41467-023-39879-3

Abstact

Chemokines are key regulators of leukocyte trafficking and attractive targets for anti-inflammatory therapy. Evasins are chemokine-binding proteins from tick saliva, whose application as anti-inflammatory therapeutics will require manipulation of their chemokine target selectivity. Here we describe subclass A3 evasins, which are unique to the tick genus Amblyomma and distinguished from "classical" class A1 evasins by an additional disulfide bond near the chemokine recognition interface. The A3 evasin EVA-AAM1001 (EVA-A) bound to CC chemokines and inhibited their receptor activation. Unlike A1 evasins, EVA-A was not highly dependent on N- and C-terminal regions to differentiate chemokine targets. Structures of chemokine-bound EVA-A revealed a deep hydrophobic pocket, unique to A3 evasins, that interacts with the residue immediately following the CC motif of the chemokine. Mutations to this pocket altered the chemokine selectivity of EVA-A. Thus, class A3 evasins provide a suitable platform for engineering proteins with applications in research, diagnosis or anti-inflammatory therapy.

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