7S54 image
Deposition Date 2021-09-09
Release Date 2022-01-12
Last Version Date 2023-10-18
Entry Detail
PDB ID:
7S54
Keywords:
Title:
Sortase A from Streptococcus agalactiae with the deltaN188 b7-b8 loop sequence from Staphylococcus aureus Sortase A
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 1 2 1
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Class A sortase, sortase A chimera
Gene (Uniprot):srtA
Chain IDs:A, B
Chain Length:173
Number of Molecules:2
Biological Source:Streptococcus agalactiae, Staphylococcus aureus (strain NCTC 8325 / PS 47)
Primary Citation
Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes.
Protein Sci. 31 701 715 (2022)
PMID: 34939250 DOI: 10.1002/pro.4266

Abstact

Sequence variation in related proteins is an important characteristic that modulates activity and selectivity. An example of a protein family with a large degree of sequence variation is that of bacterial sortases, which are cysteine transpeptidases on the surface of gram-positive bacteria. Class A sortases are responsible for attachment of diverse proteins to the cell wall to facilitate environmental adaption and interaction. These enzymes are also used in protein engineering applications for sortase-mediated ligations (SML) or sortagging of protein targets. We previously investigated SrtA from Streptococcus pneumoniae, identifying a number of putative β7-β8 loop-mediated interactions that affected in vitro enzyme function. We identified residues that contributed to the ability of S. pneumoniae SrtA to recognize several amino acids at the P1' position of the substrate motif, underlined in LPXTG, in contrast to the strict P1' Gly recognition of SrtA from Staphylococcus aureus. However, motivated by the lack of a structural model for the active, monomeric form of S. pneumoniae SrtA, here, we expanded our studies to other Streptococcus SrtA proteins. We solved the first monomeric structure of S. agalactiae SrtA which includes the C-terminus, and three others of β7-β8 loop chimeras from S. pyogenes and S. agalactiae SrtA. These structures and accompanying biochemical data support our previously identified β7-β8 loop-mediated interactions and provide additional insight into their role in Class A sortase substrate selectivity. A greater understanding of individual SrtA sequence and structural determinants of target selectivity may also facilitate the design or discovery of improved sortagging tools.

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Primary Citation of related structures