7S2X image
Deposition Date 2021-09-04
Release Date 2022-04-06
Last Version Date 2023-10-18
Entry Detail
PDB ID:
7S2X
Title:
Structure of SalC, a gamma-lactam-beta-lactone bicyclase for salinosporamide biosynthesis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SalC
Gene (Uniprot):salC
Chain IDs:A, B, C, D
Chain Length:597
Number of Molecules:4
Biological Source:Salinispora tropica
Primary Citation
Enzymatic assembly of the salinosporamide gamma-lactam-beta-lactone anticancer warhead.
Nat.Chem.Biol. 18 538 546 (2022)
PMID: 35314816 DOI: 10.1038/s41589-022-00993-w

Abstact

The marine microbial natural product salinosporamide A (marizomib) is a potent proteasome inhibitor currently in clinical trials for the treatment of brain cancer. Salinosporamide A is characterized by a complex and densely functionalized γ-lactam-β-lactone bicyclic warhead, the assembly of which has long remained a biosynthetic mystery. Here, we report an enzymatic route to the salinosporamide core catalyzed by a standalone ketosynthase (KS), SalC. Chemoenzymatic synthesis of carrier protein-tethered substrates, as well as intact proteomics, allowed us to probe the reactivity of SalC and understand its role as an intramolecular aldolase/β-lactone synthase with roles in both transacylation and bond-forming reactions. Additionally, we present the 2.85-Å SalC crystal structure that, combined with site-directed mutagenesis, allowed us to propose a bicyclization reaction mechanism. This work challenges our current understanding of the role of KS enzymes and establishes a basis for future efforts toward streamlined production of a clinically relevant chemotherapeutic.

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Primary Citation of related structures