7RY7 image
Entry Detail
PDB ID:
7RY7
Keywords:
Title:
Structure of Plasmepsin X (PM10, PMX) from Plasmodium falciparum 3D7
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2021-08-24
Release Date:
2022-02-02
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Plasmepsin X
Chain IDs:A
Chain Length:467
Number of Molecules:1
Biological Source:Plasmodium falciparum (isolate 3D7)
Primary Citation
Structures of plasmepsin X from Plasmodium falciparum reveal a novel inactivation mechanism of the zymogen and molecular basis for binding of inhibitors in mature enzyme.
Protein Sci. 31 882 899 (2022)
PMID: 35048450 DOI: 10.1002/pro.4279

Abstact

Plasmodium falciparum plasmepsin X (PfPMX), involved in the invasion and egress of this deadliest malarial parasite, is essential for its survival and hence considered as an important drug target. We report the first crystal structure of PfPMX zymogen containing a novel fold of its prosegment. A unique twisted loop from the prosegment and arginine 244 from the mature enzyme is involved in zymogen inactivation; such mechanism, not previously reported, might be common for apicomplexan proteases similar to PfPMX. The maturation of PfPMX zymogen occurs through cleavage of its prosegment at multiple sites. Our data provide thorough insights into the mode of binding of a substrate and a potent inhibitor 49c to PfPMX. We present molecular details of inactivation, maturation, and inhibition of PfPMX that should aid in the development of potent inhibitors against pepsin-like aspartic proteases from apicomplexan parasites.

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