7RUQ image
Deposition Date 2021-08-18
Release Date 2022-08-24
Last Version Date 2023-10-25
Entry Detail
PDB ID:
7RUQ
Keywords:
Title:
Structure of the human GIGYF1-TNRC6C complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GRB10-interacting GYF protein 1
Gene (Uniprot):GIGYF1
Chain IDs:A, B (auth: C)
Chain Length:73
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Trinucleotide repeat-containing gene 6C protein
Gene (Uniprot):TNRC6C
Chain IDs:C (auth: D), D (auth: B)
Chain Length:16
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSU A CYS modified residue
Primary Citation
Molecular basis for GIGYF-TNRC6 complex assembly.
Rna 29 724 734 (2023)
PMID: 36854607 DOI: 10.1261/rna.079596.123

Abstact

The GIGYF proteins interact with 4EHP and RNA-associated proteins to elicit transcript-specific translational repression. However, the mechanism by which the GIGYF1/2-4EHP complex is recruited to its target transcripts remain unclear. Here, we report the crystal structures of the GYF domains from GIGYF1 and GIGYF2 in complex with proline-rich sequences from the miRISC-binding proteins TNRC6C and TNRC6A, respectively. The TNRC6 proline-rich motifs bind to a conserved array of aromatic residues on the surface of the GIGYF1/2 GYF domains, thereby bridging 4EHP to Argonaute-miRNA complexes. Our structures also reveal a phenylalanine residue conserved from yeast to human GYF domains that contributes to GIGYF2 thermostability. The molecular details we outline here are likely to be conserved between GIGYF1/2 and other RNA-binding proteins to elicit 4EHP-mediated repression in different biological contexts.

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Primary Citation of related structures