7RMQ image
Entry Detail
PDB ID:
7RMQ
Keywords:
Title:
Crystal structure of cycloviolacin O2
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-07-28
Release Date:
2021-09-22
Method Details:
Experimental Method:
Resolution:
1.17 Å
R-Value Free:
0.23
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cycloviolacin O2
Chain IDs:A
Chain Length:30
Number of Molecules:1
Biological Source:Viola odorata
Polymer Type:polypeptide(L)
Description:D-[I11L]cycloviolacin O2
Chain IDs:B
Chain Length:30
Number of Molecules:1
Biological Source:Viola odorata
Ligand Molecules
Primary Citation
Enabling Efficient Folding and High-Resolution Crystallographic Analysis of Bracelet Cyclotides.
Molecules 26 ? ? (2021)
PMID: 34577034 DOI: 10.3390/molecules26185554

Abstact

Cyclotides have attracted great interest as drug design scaffolds because of their unique cyclic cystine knotted topology. They are classified into three subfamilies, among which the bracelet subfamily represents the majority and comprises the most bioactive cyclotides, but are the most poorly utilized in drug design applications. A long-standing challenge has been the very low in vitro folding yields of bracelets, hampering efforts to characterize their structures and activities. Herein, we report substantial increases in bracelet folding yields enabled by a single point mutation of residue Ile-11 to Leu or Gly. We applied this discovery to synthesize mirror image enantiomers and used quasi-racemic crystallography to elucidate the first crystal structures of bracelet cyclotides. This study provides a facile strategy to produce bracelet cyclotides, leading to a general method to easily access their atomic resolution structures and providing a basis for development of biotechnological applications.

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