7RM5 image
Deposition Date 2021-07-26
Release Date 2021-09-08
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7RM5
Title:
MicroED structure of the human adenosine receptor at 2.8A
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.79 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
C 2 2 21
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adenosine receptor A2a/Soluble cytochrome b562 chimera
Gene (Uniprot):cybC, ADORA2A
Chain IDs:A
Chain Length:447
Number of Molecules:1
Biological Source:Homo sapiens, Escherichia coli
Primary Citation
MicroED structure of the human adenosine receptor determined from a single nanocrystal in LCP.
Proc.Natl.Acad.Sci.USA 118 ? ? (2021)
PMID: 34462357 DOI: 10.1073/pnas.2106041118

Abstact

G protein-coupled receptors (GPCRs), or seven-transmembrane receptors, are a superfamily of membrane proteins that are critically important to physiological processes in the human body. Determining high-resolution structures of GPCRs without bound cognate signaling partners, such as a G protein, requires crystallization in lipidic cubic phase (LCP). GPCR crystals grown in LCP are often too small for traditional X-ray crystallography. These microcrystals are ideal for investigation by microcrystal electron diffraction (MicroED), but the gel-like nature of LCP makes traditional approaches to MicroED sample preparation insurmountable. Here, we show that the structure of a human A2A adenosine receptor can be determined by MicroED after converting the LCP into the sponge phase followed by focused ion-beam milling. We determined the structure of the A2A adenosine receptor to 2.8-Å resolution and resolved an antagonist in its orthosteric ligand-binding site, as well as four cholesterol molecules bound around the receptor. This study lays the groundwork for future structural studies of lipid-embedded membrane proteins by MicroED using single microcrystals that would be impossible with other crystallographic methods.

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