ISDA

Entry Detail

PDB ID:

7RKY

EMDB ID:

EMD-24507

Keywords:

MEMBRANE PROTEIN

Title:

Binding mode of US27-Gi-scFv16 in OCL-state

Biological Source:

Source Organism:

Homo sapiens, Mus musculus, Human cytomegalovirus

Host Organism:

Trichoplusia ni

PDB Version:

Deposition Date:

2021-07-22

Release Date:

2022-01-26

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.80 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(i) subunit alpha-1
Chain IDs:A
Chain Length:353
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P63096 Pfam ID:PF00503

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Chain IDs:B
Chain Length:345
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62873 Pfam ID:PF00400

Protein Blast

Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:C
Chain Length:67
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P59768 Pfam ID:PF00631

Polymer Type:polypeptide(L)
Description:Antibody fragment scFv16
Chain IDs:D
Chain Length:256
Number of Molecules:1
Biological Source:Mus musculus

Protein Blast

Polymer Type:polypeptide(L)
Description:G-protein coupled receptor homolog US27
Chain IDs:E (auth: R)
Chain Length:382
Number of Molecules:1
Biological Source:Human cytomegalovirus

UniProt ID:P09703 Pfam ID:PF00001

Ligand Molecules

GDP

Primary Citation

Atypical structural snapshots of human cytomegalovirus GPCR interactions with host G proteins

Tsutsumi, N, Maeda, S, Qu, Q, Voegele, M, Jude, K.M, Suomivuori, C.M, Panova, O, Waghray, D, Kato, H.E, Velasco, A, Dror, R.O, Skiniotis, G, Kobilka, B.K, Garcia, K.C.Show

Sci Adv 8 eabl5442 ? (2022)

DOI: 10.1126/sciadv.abl5442

Primary Citation of related structures