ISDA

Deposition Date 2021-07-22

Release Date 2022-01-26

Last Version Date 2024-10-23

Entry Detail

PDB ID:

7RKF

Keywords:

MEMBRANE PROTEIN

Title:

Structure of CX3CL1-US28-G11iN18-scFv16 in TL-state

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Human cytomegalovirus (Taxon ID: 10359)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.00 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein subunit alpha-11
Gene (Uniprot):GNA11
Chain IDs:A
Chain Length:352
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P29992 Pfam ID:PF00503

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):GNB1
Chain IDs:B
Chain Length:345
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62873 Pfam ID:PF00400

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Gene (Uniprot):GNG2
Chain IDs:C
Chain Length:67
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P59768 Pfam ID:PF00631

Polymer Type:polypeptide(L)
Molecule:Antibody fragment scFv16
Chain IDs:D
Chain Length:256
Number of Molecules:1
Biological Source:Mus musculus

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fractalkine
Gene (Uniprot):CX3CL1
Chain IDs:E (auth: L)
Chain Length:91
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P78423 Pfam ID:PF00048

Protein Blast

Polymer Type:polypeptide(L)
Molecule:G-protein coupled receptor homolog US28
Gene (Uniprot):US28
Chain IDs:F (auth: R)
Chain Length:362
Number of Molecules:1
Biological Source:Human cytomegalovirus

UniProt ID:P69332 Pfam ID:PF00001

Primary Citation

Atypical structural snapshots of human cytomegalovirus GPCR interactions with host G proteins

Tsutsumi, N, Maeda, S, Qu, Q, Voegele, M, Jude, K.M, Suomivuori, C.M, Panova, O, Waghray, D, Kato, H.E, Velasco, A, Dror, R.O, Skiniotis, G, Kobilka, B.K, Garcia, K.C.Show

Sci Adv 8 eabl5442 ? (2022)

DOI: 10.1126/sciadv.abl5442

Primary Citation of related structures