7RGW image
Deposition Date 2021-07-15
Release Date 2022-07-20
Last Version Date 2023-10-25
Entry Detail
PDB ID:
7RGW
Keywords:
Title:
Crystal structure of HERC2 DOC domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.99 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase HERC2
Gene (Uniprot):HERC2
Chain IDs:A
Chain Length:174
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The ZZ domain of HERC2 is a receptor of arginylated substrates.
Sci Rep 12 6063 6063 (2022)
PMID: 35411094 DOI: 10.1038/s41598-022-10119-w

Abstact

The E3 ubiquitin ligase HERC2 has been linked to neurological diseases and cancer, however it remains a poorly characterized human protein. Here, we show that the ZZ domain of HERC2 (HERC2ZZ) recognizes a mimetic of the Nt-R cargo degradation signal. NMR titration experiments and mutagenesis results reveal that the Nt-R mimetic peptide occupies a well-defined binding site of HERC2ZZ comprising of the negatively charged aspartic acids. We report the crystal structure of the DOC domain of HERC2 (HERC2DOC) that is adjacent to HERC2ZZ and show that a conformational rearrangement in the protein may occur when the two domains are linked. Immunofluorescence microscopy data suggest that the stimulation of autophagy promotes targeting of HERC2 to the proteasome. Our findings suggest a role of cytosolic HERC2 in the ubiquitin-dependent degradation pathways.

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Primary Citation of related structures