7RGF image
Deposition Date 2021-07-15
Release Date 2022-03-16
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7RGF
Keywords:
Title:
Protocadherin gammaC4 EC1-4 crystal structure disrupted trans interface
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protocadherin gamma C4
Gene (Uniprot):Pcdhgc4
Chain IDs:A, B
Chain Length:429
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
How clustered protocadherin binding specificity is tuned for neuronal self-/nonself-recognition.
Elife 11 ? ? (2022)
PMID: 35253643 DOI: 10.7554/eLife.72416

Abstact

The stochastic expression of fewer than 60 clustered protocadherin (cPcdh) isoforms provides diverse identities to individual vertebrate neurons and a molecular basis for self-/nonself-discrimination. cPcdhs form chains mediated by alternating cis and trans interactions between apposed membranes, which has been suggested to signal self-recognition. Such a mechanism requires that cPcdh cis dimers form promiscuously to generate diverse recognition units, and that trans interactions have precise specificity so that isoform mismatches terminate chain growth. However, the extent to which cPcdh interactions fulfill these requirements has not been definitively demonstrated. Here, we report biophysical experiments showing that cPcdh cis interactions are promiscuous, but with preferences favoring formation of heterologous cis dimers. Trans homophilic interactions are remarkably precise, with no evidence for heterophilic interactions between different isoforms. A new C-type cPcdh crystal structure and mutagenesis data help to explain these observations. Overall, the interaction characteristics we report for cPcdhs help explain their function in neuronal self-/nonself-discrimination.

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