7RFB image
Entry Detail
PDB ID:
7RFB
Title:
Crystal structure of broadly neutralizing antibody mAb1198 in complex with Hepatitis C virus envelope glycoprotein E2 ectodomain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-07-14
Release Date:
2022-01-12
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:mAb1198 Heavy Chain
Chain IDs:A, E (auth: H)
Chain Length:237
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:mAb1198 Light Chain
Chain IDs:B, F (auth: L)
Chain Length:220
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:envelope glycoprotein E2
Chain IDs:C, D
Chain Length:262
Number of Molecules:2
Biological Source:Hepacivirus C
Ligand Molecules
Primary Citation
Analysis of antibodies from HCV elite neutralizers identifies genetic determinants of broad neutralization.
Immunity 55 341 354.e7 (2022)
PMID: 34990590 DOI: 10.1016/j.immuni.2021.12.003

Abstact

The high genetic diversity of hepatitis C virus (HCV) complicates effective vaccine development. We screened a cohort of 435 HCV-infected individuals and found that 2%-5% demonstrated outstanding HCV-neutralizing activity. From four of these patients, we isolated 310 HCV antibodies, including neutralizing antibodies with exceptional breadth and potency. High neutralizing activity was enabled by the use of the VH1-69 heavy-chain gene segment, somatic mutations within CDRH1, and CDRH2 hydrophobicity. Structural and mutational analyses revealed an important role for mutations replacing the serines at positions 30 and 31, as well as the presence of neutral and hydrophobic residues at the tip of the CDRH3. Based on these characteristics, we computationally created a de novo antibody with a fully synthetic VH1-69 heavy chain that efficiently neutralized multiple HCV genotypes. Our findings provide a deep understanding of the generation of broadly HCV-neutralizing antibodies that can guide the design of effective vaccine candidates.

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Primary Citation of related structures