7R8X image
Deposition Date 2021-06-27
Release Date 2021-10-06
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7R8X
Title:
Crystal Structure of the LNK SH2 Domain in Complex with an EPOR pY454 Phosphopeptide
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SH2B adapter protein 3
Gene (Uniprot):Sh2b3
Chain IDs:A
Chain Length:111
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:EPOR pY454 phosphopeptide
Chain IDs:B (auth: C)
Chain Length:8
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural and functional analysis of target recognition by the lymphocyte adaptor protein LNK.
Nat Commun 12 6110 6110 (2021)
PMID: 34671038 DOI: 10.1038/s41467-021-26394-6

Abstact

The SH2B family of adaptor proteins, SH2-B, APS, and LNK are key modulators of cellular signalling pathways. Whilst SH2-B and APS have been partially structurally and biochemically characterised, to date there has been no such characterisation of LNK. Here we present two crystal structures of the LNK substrate recognition domain, the SH2 domain, bound to phosphorylated motifs from JAK2 and EPOR, and biochemically define the basis for target recognition. The LNK SH2 domain adopts a canonical SH2 domain fold with an additional N-terminal helix. Targeted analysis of binding to phosphosites in signalling pathways indicated that specificity is conferred by amino acids one- and three-residues downstream of the phosphotyrosine. Several mutations in LNK showed impaired target binding in vitro and a reduced ability to inhibit signalling, allowing an understanding of the molecular basis of LNK dysfunction in variants identified in patients with myeloproliferative disease.

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Primary Citation of related structures