7R8I image
Deposition Date 2021-06-26
Release Date 2022-11-09
Last Version Date 2024-05-22
Entry Detail
PDB ID:
7R8I
Keywords:
HYDROLASE/DNA
Title:
Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+
Biological Source:
Source Organism:
Pseudooceanicola lipolyticus (Taxon ID: 2029104)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.40 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
I 2 3
7R8I validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Argonaute
Gene (Uniprot):CVM52_05730
Chain IDs:A
Chain Length:789
Number of Molecules:1
Biological Source:Pseudooceanicola lipolyticus
UniProt ID:A0A2M8J4C7
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*TP*AP*CP*TP*GP*CP*AP*CP*AP*GP*GP*TP*GP*AP*CP*GP*A)
Chain IDs:B (auth: T)
Chain Length:18
Number of Molecules:1
Biological Source:Pseudooceanicola lipolyticus
Ligand Molecules
MG
Primary Citation
Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+
To be published ? ? ? (?)
Primary Citation of related structures
7R8I