7R09 image
Deposition Date 2022-02-01
Release Date 2022-04-06
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7R09
Keywords:
Title:
Amine Dehydrogenase MATOUAmDH2 in complex with NADP+ and Cyclohexylamine
Biological Source:
Source Organism:
metagenome (Taxon ID: 256318)
Method Details:
Experimental Method:
Resolution:
2.08 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Amine Dehydrogenase
Chain IDs:A
Chain Length:351
Number of Molecules:1
Biological Source:metagenome
Primary Citation
Structure and Mutation of the Native Amine Dehydrogenase MATOUAmDH2.
Chembiochem 23 e202200136 e202200136 (2022)
PMID: 35349204 DOI: 10.1002/cbic.202200136

Abstact

Native amine dehydrogenases (nat-AmDHs) have recently emerged as a potentially valuable new reservoir of enzymes for the sustainable and selective synthesis of chiral amines, catalyzing the NAD(P)H-dependent ammoniation of carbonyl compounds with high activity and selectivity. MATOUAmDH2, recently identified from the Marine Atlas of Tara Oceans Unigenes (MATOUv1) database of eukaryotic genes, displays exceptional catalytic performance against its best identified substrate, isobutyraldehyde, as well as having broader substrate scope than other nat-AmDHs. In the interests of providing a platform for the rational engineering of this and other nat-AmDHs, we have determined the structure of MATOUAmDH2 in complex with NADP+ and also with the cofactor and cyclohexylamine. Monomers within the structure are representative of more open and closed conformations of the enzyme and illustrate the profound changes undergone by nat-AmDHs during the catalytic cycle. An alanine screen of active site residues revealed that M215A and L180A are more active than the wild-type enzyme for the amination of cyclohexanone with ammonia and methylamine respectively; the latter suggests that AmDHs have the potential to be engineered for the improved production of secondary amines.

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