7QXM image
Entry Detail
PDB ID:
7QXM
Keywords:
Title:
Crystal structure of the Vibrio cholerae replicative helicase (DnaB)
Biological Source:
PDB Version:
Deposition Date:
2022-01-26
Release Date:
2022-05-25
Method Details:
Experimental Method:
Resolution:
3.80 Å
R-Value Free:
0.27
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Replicative DNA helicase
Chain IDs:A, B, C, D, E, F
Chain Length:474
Number of Molecules:6
Biological Source:Vibrio cholerae
Ligand Molecules
Primary Citation
The apo-form of the Vibrio cholerae replicative helicase DnaB is a labile and inactive planar trimer of dimers.
Febs Lett. 596 2031 2040 (2022)
PMID: 35568982 DOI: 10.1002/1873-3468.14403

Abstact

To enable chromosomal replication, DNA is unwound by the ATPase molecular motor replicative helicase. The bacterial helicase DnaB is a ring-shaped homo-hexamer whose conformational dynamics are being studied through its different 3D structural states adopted along its functional cycle. Our findings describe a new crystal structure for the apo-DnaB from Vibrio cholerae, forming a planar hexamer with pseudo-symmetry, constituted by a trimer of dimers in which the C-terminal domains delimit a triskelion-shaped hole. This hexamer is labile and inactive. We suggest that it represents an intermediate state allowing the formation of the active NTP-bound hexamer from dimers.

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Primary Citation of related structures