7QRG image
Entry Detail
PDB ID:
7QRG
Keywords:
Title:
Structure of the post-fusion complex between precursor membrane ectodomain (prM) and envelope ectodomain protein (E) from tick-borne encephalitis virus
Biological Source:
PDB Version:
Deposition Date:
2022-01-11
Release Date:
2022-05-25
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Envelope protein E
Chain IDs:A
Chain Length:443
Number of Molecules:1
Biological Source:Tick-borne encephalitis virus (WESTERN SUBTYPE)
Polymer Type:polypeptide(L)
Description:Genome polyprotein
Chain IDs:B (auth: D)
Chain Length:138
Number of Molecules:1
Biological Source:Tick-borne encephalitis virus (WESTERN SUBTYPE)
Ligand Molecules
Primary Citation
Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery.
Nat Commun 13 3718 3718 (2022)
PMID: 35764616 DOI: 10.1038/s41467-022-31111-y

Abstact

The flavivirus envelope glycoproteins prM and E drive the assembly of icosahedral, spiky immature particles that bud across the membrane of the endoplasmic reticulum. Maturation into infectious virions in the trans-Golgi network involves an acid-pH-driven rearrangement into smooth particles made of (prM/E)2 dimers exposing a furin site for prM cleavage into "pr" and "M". Here we show that the prM "pr" moiety derives from an HSP40 cellular chaperonin. Furthermore, the X-ray structure of the tick-borne encephalitis virus (pr/E)2 dimer at acidic pH reveals the E 150-loop as a hinged-lid that opens at low pH to expose a positively-charged pr-binding pocket at the E dimer interface, inducing (prM/E)2 dimer formation to generate smooth particles in the Golgi. Furin cleavage is followed by lid-closure upon deprotonation in the neutral-pH extracellular environment, expelling pr while the 150-loop takes the relay in fusion loop protection, thus revealing the elusive flavivirus mechanism of fusion activation.

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Primary Citation of related structures