7QOB image
Deposition Date 2021-12-23
Release Date 2023-01-18
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7QOB
Keywords:
Title:
Human Carbonic Anhydrase I in complex with benzoselenoate
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Carbonic anhydrase 1
Gene (Uniprot):CA1
Chain IDs:A (auth: AAA), B (auth: BBB)
Chain Length:261
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Benzoselenoates: A novel class of carbonic anhydrase inhibitors.
Bioorg.Chem. 122 105751 105751 (2022)
PMID: 35344894 DOI: 10.1016/j.bioorg.2022.105751

Abstact

A series of benzoselenoates has been prepared and their inhibitory properties against the most relevant human Carbonic Anhydrases (CAs) isoforms, among which hCA I, II, IV, VII, IX, and XII were investigated. These inhibitors were designed considering the carboxylates and mono-/dithiocarbamates as lead and led to the observation that the COSe- is a new zinc-binding group (ZBG) for metalloenzymes possessing zinc ions at their active site. The substitution pattern on aromatic ring of the benzoselenoates is the crucial structural element influencing selectivity towards various isoforms. We elucidated the binding mode of benzoselenoates to hCA I and hCA II by using X-ray crystallography. The negatively charged selenium atom from the new ZBG was observed coordinated to the zinc ion from the CA active site at a distance of 2.30-2.40 Å from it. Overall, these data might be useful for the development of new inhibitors with higher selectivity and efficacy for various hCAs.

Legend

Protein

Chemical

Disease

Primary Citation of related structures