7QO4 image
Deposition Date 2021-12-23
Release Date 2022-06-01
Last Version Date 2022-06-01
Entry Detail
PDB ID:
7QO4
Keywords:
MOTOR PROTEIN
Title:
26S proteasome WT-Ubp6-UbVS complex in the si state (ATPases, Rpn1, Ubp6, and UbVS)
Biological Source:
Source Organism:
Saccharomyces cerevisiae (Taxon ID: 4932)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
7.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7QO4 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin carboxyl-terminal hydrolase
Chain IDs:H (auth: 8)
Chain Length:499
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P43593 Pfam ID:PF00443
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polyubiquitin-B
Chain IDs:I (auth: 9)
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P0CG47 Pfam ID:PF00240
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT1 isoform 1
Chain IDs:B (auth: H)
Chain Length:467
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P33299 Pfam ID:PF21236, PF00004, PF17862
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT2 isoform 1
Chain IDs:C (auth: I)
Chain Length:437
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P40327 Pfam ID:PF16450, PF00004, PF17862
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT6 isoform 1
Chain IDs:G (auth: J)
Chain Length:405
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:Q01939 Pfam ID:PF16450, PF00004, PF17862
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT3 isoform 1
Chain IDs:D (auth: K)
Chain Length:428
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P33298 Pfam ID:PF16450, PF00004
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT4 isoform 1
Chain IDs:E (auth: L)
Chain Length:437
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P53549 Pfam ID:PF16450, PF00004, PF17862
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RPT5 isoform 1
Chain IDs:F (auth: M)
Chain Length:434
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P33297 Pfam ID:PF16450, PF00004, PF17862
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:26S proteasome regulatory subunit RPN1
Gene (Uniprot):RPN1
Chain IDs:A (auth: Z)
Chain Length:993
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P38764 Pfam ID:PF17781, PF01851, PF18051
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
GLZ I GLY modified residue
Ligand Molecules
ADP
ATP
MG
Primary Citation
Allosteric control of Ubp6 and the proteasome via a bidirectional switch.
Nat Commun 13 838 ? (2022)
DOI: 10.1038/s41467-022-28186-y
Primary Citation of related structures
7QO4
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