7QIC image
Entry Detail
PDB ID:
7QIC
EMDB ID:
Title:
Structure of magnesium-bound EleNRMT in complex with two nanobodies at 4.1A
Biological Source:
PDB Version:
Deposition Date:
2021-12-14
Release Date:
2021-12-29
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Divalent metal cation transporter
Mutations:E88Q, A151S, E193Q, R207H, S244T, I256V, S275A, V366I, V385I, V418L, V429A
Chain IDs:A
Chain Length:438
Number of Molecules:1
Biological Source:Eggerthella lenta
Polymer Type:polypeptide(L)
Description:Nanobody 2
Chain IDs:C (auth: B)
Chain Length:125
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Description:Nanobody 1
Chain IDs:B (auth: C)
Chain Length:119
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Structural and functional properties of a magnesium transporter of the SLC11/NRAMP family.
Elife 11 ? ? (2022)
PMID: 35001872 DOI: 10.7554/eLife.74589

Abstact

Members of the ubiquitous SLC11/NRAMP family catalyze the uptake of divalent transition metal ions into cells. They have evolved to efficiently select these trace elements from a large pool of Ca2+ and Mg2+, which are both orders of magnitude more abundant, and to concentrate them in the cytoplasm aided by the cotransport of H+ serving as energy source. In the present study, we have characterized a member of a distant clade of the family found in prokaryotes, termed NRMTs, that were proposed to function as transporters of Mg2+. The protein transports Mg2+ and Mn2+ but not Ca2+ by a mechanism that is not coupled to H+. Structures determined by cryo-EM and X-ray crystallography revealed a generally similar protein architecture compared to classical NRAMPs, with a restructured ion binding site whose increased volume provides suitable interactions with ions that likely have retained much of their hydration shell.

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Primary Citation of related structures