7QDX image
Deposition Date 2021-11-30
Release Date 2023-06-14
Last Version Date 2024-02-07
Entry Detail
PDB ID:
7QDX
Keywords:
Title:
bacterial IMPDH chimera
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Inosine-5'-monophosphate dehydrogenase
Gene (Uniprot):guaB, guaB
Chain IDs:A, B
Chain Length:507
Number of Molecules:2
Biological Source:Escherichia coli, Pseudomonas aeruginosa PAO1
Primary Citation
Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci. 32 e4703 e4703 (2023)
PMID: 37338125 DOI: 10.1002/pro.4703

Abstact

Inosine 5'-monophosphate (IMP) dehydrogenase (IMPDH) is an ubiquitous enzyme that catalyzes the NAD+ -dependent oxidation of inosine 5'-monophosphate into xanthosine 5'-monophosphate. This enzyme is formed of two distinct domains, a core domain where the catalytic reaction occurs, and a less-conserved Bateman domain. Our previous studies gave rise to the classification of bacterial IMPDHs into two classes, according to their oligomeric and kinetic properties. MgATP is a common effector but cause to different effects when it binds within the Bateman domain: it is either an allosteric activator for Class I IMPDHs or a modulator of the oligomeric state for Class II IMPDHs. To get insight into the role of the Bateman domain in the dissimilar properties of the two classes, deleted variants of the Bateman domain and chimeras issued from the interchange of the Bateman domain between the three selected IMPDHs have been generated and characterized using an integrative structural biology approach. Biochemical, biophysical, structural, and physiological studies of these variants unveil the Bateman domain as being the carrier of the molecular behaviors of both classes.

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