7QC0 image
Deposition Date 2021-11-21
Release Date 2022-03-23
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7QC0
Title:
Crystal structure of Cadmium translocating P-type ATPase
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.11 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cadmium translocating P-type ATPase
Chain IDs:A
Chain Length:682
Number of Molecules:1
Biological Source:Sulfitobacter sp. (strain NAS-14.1)
Primary Citation
Structure and ion-release mechanism of P IB-4 -type ATPases.
Elife 10 ? ? (2021)
PMID: 34951590 DOI: 10.7554/eLife.73124

Abstact

Transition metals, such as zinc, are essential micronutrients in all organisms, but also highly toxic in excessive amounts. Heavy-metal transporting P-type (PIB) ATPases are crucial for homeostasis, conferring cellular detoxification and redistribution through transport of these ions across cellular membranes. No structural information is available for the PIB-4-ATPases, the subclass with the broadest cargo scope, and hence even their topology remains elusive. Here, we present structures and complementary functional analyses of an archetypal PIB-4-ATPase, sCoaT from Sulfitobacter sp. NAS14-1. The data disclose the architecture, devoid of classical so-called heavy-metal-binding domains (HMBDs), and provide fundamentally new insights into the mechanism and diversity of heavy-metal transporters. We reveal several novel P-type ATPase features, including a dual role in heavy-metal release and as an internal counter ion of an invariant histidine. We also establish that the turnover of PIB-ATPases is potassium independent, contrasting to many other P-type ATPases. Combined with new inhibitory compounds, our results open up for efforts in for example drug discovery, since PIB-4-ATPases function as virulence factors in many pathogens.

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