7QBY image
Deposition Date 2021-11-21
Release Date 2022-03-30
Last Version Date 2024-06-19
Entry Detail
PDB ID:
7QBY
Keywords:
Title:
Refined structure of the T193A mutant in the C-terminal domain of DNAJB6b
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Isoform B of DnaJ homolog subfamily B member 6
Gene (Uniprot):DNAJB6
Chain IDs:A
Chain Length:57
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Microsecond Backbone Motions Modulate the Oligomerization of the DNAJB6 Chaperone.
Angew.Chem.Int.Ed.Engl. 61 e202116403 e202116403 (2022)
PMID: 35247211 DOI: 10.1002/anie.202116403

Abstact

DNAJB6 is a prime example of an anti-aggregation chaperone that functions as an oligomer. DNAJB6 oligomers are dynamic and subunit exchange is critical for inhibiting client protein aggregation. The T193A mutation in the C-terminal domain (CTD) of DNAJB6 reduces both chaperone self-oligomerization and anti-aggregation of client proteins, and has recently been linked to Parkinson's disease. Here, we show by NMR, including relaxation-based methods, that the T193A mutation has minimal effects on the structure of the β-stranded CTD but increases the population and rate of formation of a partially folded state. The results can be rationalized in terms of β-strand peptide plane flips that occur on a timescale of ≈100 μs and lead to global changes in the overall pleat/flatness of the CTD, thereby altering its ability to oligomerize. These findings help forge a link between chaperone dynamics, oligomerization and anti-aggregation activity which may possibly lead to new therapeutic avenues tuned to target specific substrates.

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Primary Citation of related structures