7QAN image
Entry Detail
PDB ID:
7QAN
Keywords:
Title:
Cytochrome P450 Enzyme AbyV
Biological Source:
PDB Version:
Deposition Date:
2021-11-17
Release Date:
2022-11-30
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.23
R-Value Work:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cytochrome P450
Chain IDs:A (auth: AAA), B (auth: BBB)
Chain Length:414
Number of Molecules:2
Biological Source:Micromonospora maris (strain DSM 45365 / JCM 31040 / NBRC 109089 / NRRL B-24793 / AB-18-032)
Primary Citation
The Role of Cytochrome P450 AbyV in the Final Stages of Abyssomicin C Biosynthesis.
Angew.Chem.Int.Ed.Engl. 62 e202213053 e202213053 (2023)
PMID: 36314667 DOI: 10.1002/anie.202213053

Abstact

Abyssomicin C and its atropisomer are potent inhibitors of bacterial folate metabolism. They possess complex polycyclic structures, and their biosynthesis has been shown to involve several unusual enzymatic transformations. Using a combination of synthesis and in vitro assays we reveal that AbyV, a cytochrome P450 enzyme from the aby gene cluster, catalyses a key late-stage epoxidation required for the installation of the characteristic ether-bridged core of abyssomicin C. The X-ray crystal structure of AbyV has been determined, which in combination with molecular dynamics simulations provides a structural framework for our functional data. This work demonstrates the power of combining selective carbon-13 labelling with NMR spectroscopy as a sensitive tool to interrogate enzyme-catalysed reactions in vitro with no need for purification.

Legend

Protein

Chemical

Disease

Primary Citation of related structures